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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7687070_7687759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7687070 - 7687759

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

TTTGTTTCAGCT

Flanking Amino Acid:

HLKLCKALLQKLRSLNIAQI

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

78.5

0.64

0.9

74.5

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

50.9

0.11

1.9

75.31

Associated Gene:

Gene:

RIPOR3

Ensembl Gene ID:

ENSAPLG00000007994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035847

7682113 - 7709318

27206

ENSAPLT00000027506

7681748 - 7733434

51687

ENSAPLT00000018174

7681748 - 7707070

25323

ENSAPLT00000008327

7682113 - 7710875

28763

ENSAPLT00000045647

7681748 - 7706849

25102