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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7702739_7703473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7702739 - 7703473

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCCTGTTCATCC

Flanking Amino Acid:

HKDTKRNSRLAFYYDLDKQI

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.6

38.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

46.8

-0.3

2.5

58.3

41.6

Minor BPS

43.7

-0.5

2.1

53.5

44.9

Associated Gene:

Gene:

RIPOR3

Ensembl Gene ID:

ENSAPLG00000007994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023000

7695319 - 7710903

15585

ENSAPLT00000045647

7681748 - 7706849

25102

ENSAPLT00000018174

7681748 - 7707070

25323

ENSAPLT00000035847

7682113 - 7709318

27206

ENSAPLT00000008327

7682113 - 7710875

28763

ENSAPLT00000027506

7681748 - 7733434

51687