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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7710904_7732536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7710904 - 7732536

Intron Length:

21633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCCTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.6

0.73

0.7

81.4

Minor 5ss

32.9

-2

2.7

43.5

Minor BPS

67.9

0.65

1.6

85.32

34.8

Associated Gene:

Gene:

RIPOR3

Ensembl Gene ID:

ENSAPLG00000007994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027506

7681748 - 7733434

51687