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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7740233_7744279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7740233 - 7744279

Intron Length:

4047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TATTTTGTTATA

Flanking Amino Acid:

GLGTMEVKSKFGAEFRRFSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.5

0.71

0.9

76.8

37.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

46.3

-0.2

2.2

63.03

38.3

Associated Gene:

Gene:

PARD6B

Ensembl Gene ID:

ENSAPLG00000019880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023090

7740167 - 7755450

15284