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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7744503_7752536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7744503 - 7752536

Intron Length:

8034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTATGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TATGTCTTACAG

Flanking Amino Acid:

PLLRIFIQRKEDADYSAFGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

79.3

0.66

0.9

72.4

37.6

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

-0.2

1.9

57.08

44.4

Associated Gene:

Gene:

PARD6B

Ensembl Gene ID:

ENSAPLG00000019880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023090

7740167 - 7755450

15284