Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7812906_7814817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7812906 - 7814817

Intron Length:

1912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTAAT

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATATTC

Flanking Amino Acid:

LWDPSLTKNQDYRTKPFCCS

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

79.1

36.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.5

0.57

1.1

79.2

38.4

Minor 5ss

32.4

-2

2.9

42.3

44.5

Minor BPS

63.6

0.41

1.9

79.37

Associated Gene:

Gene:

ADNP

Ensembl Gene ID:

ENSAPLG00000007870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025502

7809753 - 7834592

24840

ENSAPLT00000017486

7809500 - 7836458

26959

ENSAPLT00000038226

7809500 - 7836894

27395

ENSAPLT00000008163

7809771 - 7827382

17612

ENSAPLT00000036106

7809753 - 7827919

18167

ENSAPLT00000028091

7809500 - 7839782

30283