Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7814911_7816359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7814911 - 7816359

Intron Length:

1449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCTTCCCATCT

Flanking Amino Acid:

GLEYCKEHIEDFKQFEPNDF

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.2

0.68

0.7

73.3

31.6

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

44.6

-0.3

2.1

64.08

46.3

Associated Gene:

Gene:

ADNP

Ensembl Gene ID:

ENSAPLG00000007870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025502

7809753 - 7834592

24840

ENSAPLT00000017486

7809500 - 7836458

26959

ENSAPLT00000038226

7809500 - 7836894

27395

ENSAPLT00000008163

7809771 - 7827382

17612

ENSAPLT00000036106

7809753 - 7827919

18167

ENSAPLT00000028091

7809500 - 7839782

30283