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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7826822_7827803_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
5UTR

Intron Coordinates:
7826822 - 7827803

Intron Length:
982

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTACGGAAG

5'SS Class:
weak_major

3'SS Sequence:
AATATTATTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATTAT

U12 Branch Point Sequence:
ATTCCATGGAAT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
58.8
0.21
1.2
53.6
44.9

Major BPS
75.9
0.64
1
66.1
40.5

Major PPT
74.3
0.55
1
66.5
43.1

Minor 5ss
32.5
-2
3.4
39.6
46.1

Minor BPS
47.8
-0
1.9
70.78
39.1

Associated Gene:

Gene:
ADNP

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7809753 - 7827919
18167