Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7829543_7839628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7829543 - 7839628

Intron Length:

10086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTCTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.67

0.9

75.6

38.3

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

85.3

1.1

87.04

31.6

Associated Gene:

Gene:

ADNP

Ensembl Gene ID:

ENSAPLG00000007870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028091

7809500 - 7839782

30283