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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7856841_7857791_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7856841 - 7857791

Intron Length:
951

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTAAT

5'SS Class:
strong_major

3'SS Sequence:
CAATTGCTTATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TTCTGATGAAAT

Flanking Amino Acid:
HHPKFIPEFIRKQKEGNFDI

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.9
0.92
0.9
87
30

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
68.8
0.42
0.9
61.6
39.6

Minor 5ss
36
-1.6
3.1
50.1
46.4

Minor BPS
47
-0.1
2.2
71.47
44.8

Associated Gene:

Gene:
DPM1

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7852207 - 7862514
10308