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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8042242_8065509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8042242 - 8065509

Intron Length:

23268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTTTTCTCAAAA

Flanking Amino Acid:

QNLDQAYLDDELIDTHLSWI

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

82.1

37.7

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

77.5

0.62

0.9

40.4

Minor 5ss

45.8

-0.4

2.9

67.6

43.1

Minor BPS

68.8

0.58

1.6

80.83

34.3

Associated Gene:

Gene:

NFATC2

Ensembl Gene ID:

ENSAPLG00000007259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043069

8036747 - 8122226

85480

ENSAPLT00000007546

8042154 - 8130481

88328