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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8083317_8093272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8083317 - 8093272

Intron Length:

9956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

ATTTTGTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTCATG

Flanking Amino Acid:

LQAASNPIECSQRSAHELPM

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.65

0.9

36.8

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

-0

2.1

66.91

Associated Gene:

Gene:

NFATC2

Ensembl Gene ID:

ENSAPLG00000007259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026532

8036747 - 8122226

85480

ENSAPLT00000007546

8042154 - 8130481

88328

ENSAPLT00000043069

8036747 - 8122226

85480