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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8095013_8111108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8095013 - 8111108

Intron Length:

16096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGATTTTTAATG

Flanking Amino Acid:

APTGGHPVVQLHGYMENKPL

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.6

0.37

1.1

58.8

46.4

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

61.8

0.23

1.3

58.72

37.3

Associated Gene:

Gene:

NFATC2

Ensembl Gene ID:

ENSAPLG00000007259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043069

8036747 - 8122226

85480

ENSAPLT00000026532

8036747 - 8122226

85480

ENSAPLT00000007546

8042154 - 8130481

88328