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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8113719_8129946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8113719 - 8129946

Intron Length:

16228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATAGCCTTAAAG

Flanking Amino Acid:

YHHIMRSMDQEEPTPHKTNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.1

38.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

90.9

0.92

0.6

83.9

31.1

Minor 5ss

-1.4

3.6

56.2

48.2

Minor BPS

62.8

0.26

1.6

64.24

43.1

Associated Gene:

Gene:

NFATC2

Ensembl Gene ID:

ENSAPLG00000007259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007546

8042154 - 8130481

88328