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Intron Name: Anas_platyrhynchos_platyrhynchos_21_815536_818615_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

815536 - 818615

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

CACTAACTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TCTCCACTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

64.5

0.36

65.2

28.2

Major PPT

59.8

0.22

1.1

50.9

42.4

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

57.2

0.3

79.84

41.4

Associated Gene:

Gene:

PREX1

Ensembl Gene ID:

ENSAPLG00000010034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010521

815464 - 918244

102781