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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8161376_8161968_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

8161376 - 8161968

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTTCCATT

5'SS Class:

weak_minor

3'SS Sequence:

TTCTCAACTTCAG|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGCTTCTCAACT

Flanking Amino Acid:

CFVSFEEIARDESTGEITFY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.8

-0

1.3

57.4

46.9

Major BPS

0.75

78.6

Major PPT

78.4

0.64

0.8

75.1

33.4

Minor 5ss

60.1

0.34

2.1

42.9

Minor BPS

0.64

1.5

80.64

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006909

8147722 - 8162220

14499