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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8203039_8204576_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8203039 - 8204576

Intron Length:

1538

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGGGGGAT

5'SS Class:

major

3'SS Sequence:

CACGGGGGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

TCCCGCGGAGCC

Flanking Amino Acid:

QLSHADGSGVGGLLLVLG*

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

63.4

38.3

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

48.2

-0.1

1.1

33.6

40.4

Minor 5ss

13.9

-4.2

40.2

Minor BPS

35.4

-1.1

2.3

44.11

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044490

8201920 - 8204603

2684