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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8206705_8210526_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8206705 - 8210526

Intron Length:

3822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGCTGCAC

5'SS Class:

weak_major

3'SS Sequence:

GCCGGGTAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCGGAA

U12 Branch Point Sequence:

TGCCGGGTAACC

Flanking Amino Acid:

LPSKEMRSLPSRFRRRHRRC

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.1

37.7

Major BPS

43.4

-0.4

1.3

34.8

34.9

Major PPT

49.7

-0

1.1

39.3

42.9

Minor 5ss

-2.6

3.4

36.6

41.1

Minor BPS

38.3

-0.9

2.7

52.09

45.2

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464