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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8211279_8212048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8211279 - 8212048

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATGGGA

5'SS Class:

major

3'SS Sequence:

TTCACGTTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

TCTCCCTTCACG

Flanking Amino Acid:

EDLNDTNYDEFNGYAGSLFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

38.4

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

71.2

0.48

0.9

36.9

Minor 5ss

23.2

-3.1

3.2

29.5

43.2

Minor BPS

63.5

0.28

1.9

68.68

44.7

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395