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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8212168_8212337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8212168 - 8212337

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAC

U12 Branch Point Sequence:

TTACTCTGAGCA

Flanking Amino Acid:

KRMDERRKERREQREKEEIE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

75.7

36.7

Major BPS

53.7

0.09

1.4

49.1

Major PPT

71.6

0.49

70.8

33.8

Minor 5ss

38.9

-1.2

3.6

54.8

49.4

Minor BPS

52.4

0.07

1.7

66.78

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395