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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8212417_8212963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8212417 - 8212963

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTGAGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GATTTCTAAAAT

Flanking Amino Acid:

KIQQQFSDLKRKLAEVTEEE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.1

34.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.27

58.9

41.5

Minor 5ss

34.3

-1.8

3.1

41.3

Minor BPS

58.6

0.35

1.8

74.99

41.3

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395