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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8213141_8213746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8213141 - 8213746

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

CTCTTGTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTTTAGGAATA

Flanking Amino Acid:

NHTTVDPRQTQFGGLNTPYP

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

71.2

40.3

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

81.7

0.71

0.8

80.2

31.9

Minor 5ss

36.8

-1.5

2.9

52.3

44.3

Minor BPS

46.9

-0.2

2.3

68.84

37.7

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395