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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8213903_8214599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8213903 - 8214599

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTCACTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

GCTGGCTTCACT

Flanking Amino Acid:

NTLMDMRLSQVSDSVSGQTV

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

0.67

0.8

72.4

37.5

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

-0

2.3

67.9

48.7

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395