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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8214695_8215370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8214695 - 8215370

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

CTTTCCTTCACT

Flanking Amino Acid:

SMIPTHGGDINDIKKARLLL

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

76.2

0.59

0.8

71.1

34.5

Minor 5ss

39.5

-1.2

50.5

Minor BPS

77.7

0.95

1.7

91.67

38.1

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395