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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8225349_8226170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8225349 - 8226170

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATGTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGTCTGTCATT

Flanking Amino Acid:

ARSILALAFQANPNSEEIWL

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.4

0.75

0.8

77.5

36.5

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

48.6

-0

2.4

74.76

43.2

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395