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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8226291_8227458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8226291 - 8227458

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

CTAGTGATAAAT

Flanking Amino Acid:

KARSSAPTARVFMKSVKLEW

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

91.8

0.94

0.6

91.6

19.6

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

40.7

-0.6

2.3

58.16

44.6

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015872

8210586 - 8231980

21395

ENSAPLT00000042541

8206368 - 8231831

25464