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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8228598_8228898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8228598 - 8228898

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCTTCCTTACCA

Flanking Amino Acid:

RLKNAKNPDLWLESVRLEYR

Intron Amino Acid Position:

728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

80.3

0.68

0.8

35.3

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

76.3

0.82

1.6

83.03

38.2

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395