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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8228991_8231039_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8228991 - 8231039

Intron Length:

2049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TGACTTGATTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TCCTCCTTGACT

Flanking Amino Acid:

AKALQECPNSGILWSEAIFL

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

0.62

65.3

41.5

Major PPT

57.4

0.17

1.2

60.7

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

81.3

1.07

1.1

87.07

39.1

Associated Gene:

Gene:

PRPF6

Ensembl Gene ID:

ENSAPLG00000015219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042541

8206368 - 8231831

25464

ENSAPLT00000015872

8210586 - 8231980

21395