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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8247959_8249543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8247959 - 8249543

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CTCCCGGTATCT

Flanking Amino Acid:

LDKMVAKKSADGAMDLLKEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

64.9

0.37

29.8

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

39.7

-0.7

2.6

60.49

48.9

Associated Gene:

Gene:

TCEA2

Ensembl Gene ID:

ENSAPLG00000010208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010668

8247890 - 8265547

17658

ENSAPLT00000027139

8247890 - 8262328

14439