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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8257443_8261815_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8257443 - 8261815

Intron Length:

4373

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCCAGAATC

5'SS Class:

weak_major

3'SS Sequence:

GATGTGCTTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CTCCCTGTAGGT

Flanking Amino Acid:

ALQADAPGAFCFGVGWKVLD

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.5

67.5

40.3

Major BPS

54.4

0.11

1.2

36.4

Major PPT

49.4

-0

1.7

54.5

45.5

Minor 5ss

-2.8

3.9

45.8

Minor BPS

40.1

-0.6

2.3

56.23

46.6

Associated Gene:

Gene:

TCEA2

Ensembl Gene ID:

ENSAPLG00000010208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027139

8247890 - 8262328

14439

ENSAPLT00000010668

8247890 - 8265547

17658