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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8412141_8413805_F

Intron Information:

Intron Rank:

136698

Intron Class:

major

Intron Phase:

Intron Coordinates:

8412141 - 8413805

Intron Length:

1665

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CGTGCTGTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.8

81.1

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

69.9

0.45

0.8

61.4

Minor 5ss

22.3

-3.2

3.8

31.3

42.6

Minor BPS

-0.6

2.1

45.84

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028499

8411960 - 8416924

4965