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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8414702_8415416_F

Intron Information:

Intron Rank:

136701

Intron Class:

major

Intron Phase:

Intron Coordinates:

8414702 - 8415416

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTGTCCCCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

84.8

0.86

85.7

34.9

Major PPT

74.4

0.55

0.8

66.1

35.9

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

47.1

-0.1

2.2

72.8

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041944

8411010 - 8416924

5915

ENSAPLT00000028499

8411960 - 8416924

4965