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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8566958_8570836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8566958 - 8570836

Intron Length:

3879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

CCCTGGCTAATG

Flanking Amino Acid:

HITGNYASHRRCPTPGCDGS

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

39.3

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

89.1

0.88

0.6

84.6

23.2

Minor 5ss

33.7

-1.9

40.8

45.6

Minor BPS

36.9

-1.1

2.5

38.6

45.3

Associated Gene:

Gene:

MYT1

Ensembl Gene ID:

ENSAPLG00000007386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029406

8536899 - 8578776

41878