Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_8570900_8571509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8570900 - 8571509

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAAACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTCAAACA

Flanking Amino Acid:

HITGNYASHRSLSGCPRAKK

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.7

0.51

0.9

67.1

37.3

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

49.6

-0

66.77

40.3

Associated Gene:

Gene:

MYT1

Ensembl Gene ID:

ENSAPLG00000007386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029406

8536899 - 8578776

41878

ENSAPLT00000007705

8536899 - 8578776

41878