Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_8571594_8575224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8571594 - 8575224

Intron Length:

3631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TATGCTGTATTT

Flanking Amino Acid:

KDDKEDPELMKCPVPGCVGL

Intron Amino Acid Position:

975

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

67.7

0.4

40.4

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

46.2

-0.2

2.2

68.17

43.6

Associated Gene:

Gene:

MYT1

Ensembl Gene ID:

ENSAPLG00000007386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029406

8536899 - 8578776

41878

ENSAPLT00000007705

8536899 - 8578776

41878