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Intron Name: Anas_platyrhynchos_platyrhynchos_21_858742_862497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

858742 - 862497

Intron Length:

3756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

CTTTGTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGCTTTGTATTC

Flanking Amino Acid:

AIIKEREQRESLKLGMERDA

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.1

40.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.4

0.73

0.9

73.8

40.5

Minor 5ss

33.3

-1.9

3.2

36.6

41.7

Minor BPS

43.7

-0.5

2.1

53.39

39.5

Associated Gene:

Gene:

PREX1

Ensembl Gene ID:

ENSAPLG00000010034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046636

744231 - 918369

174139

ENSAPLT00000010521

815464 - 918244

102781