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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8592887_8593061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8592887 - 8593061

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGCCC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.1

50.5

40.4

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

25.6

-2.8

3.2

34.2

41.5

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

PCMTD2

Ensembl Gene ID:

ENSAPLG00000007753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046634

8592526 - 8601682

9157