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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8593268_8595329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8593268 - 8595329

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTAC

5'SS Class:

major

3'SS Sequence:

TTCTCTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTTCCTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

72.2

33.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

85.5

0.8

0.6

85.1

22.5

Minor 5ss

42.9

-0.8

2.4

52.8

44.4

Minor BPS

65.9

0.58

1.9

85.32

40.8

Associated Gene:

Gene:

PCMTD2

Ensembl Gene ID:

ENSAPLG00000007753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046634

8592526 - 8601682

9157

ENSAPLT00000008047

8591724 - 8601738

10015