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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8595663_8596623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8595663 - 8596623

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATACC

5'SS Class:

major

3'SS Sequence:

TCTAAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TTTTCTCTAAAT

Flanking Amino Acid:

YLSSMVGLILGPFGVNHGVE

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

72.1

37.7

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

77.9

0.63

0.9

73.8

40.3

Minor 5ss

35.9

-1.6

2.7

38.5

39.5

Minor BPS

69.7

0.7

1.7

90.15

33.3

Associated Gene:

Gene:

PCMTD2

Ensembl Gene ID:

ENSAPLG00000007753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008047

8591724 - 8601738

10015

ENSAPLT00000046634

8592526 - 8601682

9157