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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8598684_8599688_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8598684 - 8599688

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGAGTGC

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTGGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

AGTAAAATAACA

Flanking Amino Acid:

GILVMPLEEKLTKITRTGPS

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.3

50.2

41.6

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

74.2

0.55

73.5

41.9

Minor 5ss

31.4

-2.1

3.4

41.8

Minor BPS

45.2

-0.3

59.52

38.8

Associated Gene:

Gene:

PCMTD2

Ensembl Gene ID:

ENSAPLG00000007753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046634

8592526 - 8601682

9157

ENSAPLT00000008047

8591724 - 8601738

10015