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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8599813_8601302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8599813 - 8601302

Intron Length:

1490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

CATTTTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTCTGTATCT

Flanking Amino Acid:

DSGKSRLVHLPPVAVRSLQD

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

67.6

39.4

Major BPS

100

1.24

0.5

100

Major PPT

78.9

0.65

0.9

77.2

36.8

Minor 5ss

31.5

-2.1

2.6

30.3

35.2

Minor BPS

53.6

0.19

2.3

79.06

43.7

Associated Gene:

Gene:

PCMTD2

Ensembl Gene ID:

ENSAPLG00000007753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046634

8592526 - 8601682

9157

ENSAPLT00000008047

8591724 - 8601738

10015