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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8635849_8636021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8635849 - 8636021

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TGCTCCTCAGTC

Flanking Amino Acid:

IQATARIIVQDSPRFLLVPT

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

52.6

0.06

1.8

63.43

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022472

8608312 - 8650116

41805