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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8640446_8641888_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8640446 - 8641888

Intron Length:

1443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGCGTAT

5'SS Class:

weak_major

3'SS Sequence:

GTGCTTCGGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAATTTAGAATT

Flanking Amino Acid:

TSSAMQLTITATDVGRSGDT

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.3

57.8

43.7

Major BPS

65.7

0.39

71.3

30.3

Major PPT

49.8

-0

1.2

51.7

Minor 5ss

-0.8

3.6

63.6

48.1

Minor BPS

47.1

-0.1

1.6

62.03

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022472

8608312 - 8650116

41805

ENSAPLT00000008253

8608312 - 8648304

39993