Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_8653482_8655505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8653482 - 8655505

Intron Length:

2024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

GCTCTCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CTTGCTCTGACC

Flanking Amino Acid:

NLSQGSSAHRPWYFSKISRS

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.3

70.1

40.6

Major BPS

69.1

0.47

60.7

37.6

Major PPT

71.4

0.48

0.8

61.9

34.8

Minor 5ss

38.9

-1.3

2.7

51.9

37.5

Minor BPS

51.8

0.04

1.8

65.93

40.4

Associated Gene:

Gene:

SRMS

Ensembl Gene ID:

ENSAPLG00000008178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045131

8650652 - 8662536

11885