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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8657715_8658121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8657715 - 8658121

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

GGGTTCATGACA

Flanking Amino Acid:

SVPVAIKIIKADMKAEDFTK

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

38.3

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

78.5

0.64

0.7

70.1

30.8

Minor 5ss

25.5

-2.8

3.1

31.8

42.5

Minor BPS

51.5

0.04

1.6

60.48

39.2

Associated Gene:

Gene:

SRMS

Ensembl Gene ID:

ENSAPLG00000008178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045131

8650652 - 8662536

11885

ENSAPLT00000008499

8653126 - 8659698

6573