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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8664698_8665485_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8664698 - 8665485

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGTAAGAA

5'SS Class:

major

3'SS Sequence:

AGGCAAAACCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

CTGTGCAAATCT

Flanking Amino Acid:

GLSGNPPRAPCLSGVRAGRW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

55.1

30.6

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

48.4

-0

33.9

39.2

Minor 5ss

29.9

-2.3

3.3

34.1

44.1

Minor BPS

-0.6

2.4

60.04

49.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046236

8662002 - 8665598

3597