Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_8675452_8679214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8675452 - 8679214

Intron Length:

3763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTGGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TTGTGTCTCACT

Flanking Amino Acid:

IEKFEKEAAEMGKGSFKYAW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

66.9

0.38

1.2

61.5

48.6

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

45.8

-0.2

2.4

71.87

45.4

Associated Gene:

Gene:

EEF1A2

Ensembl Gene ID:

ENSAPLG00000008691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024254

8675238 - 8745022

69785

ENSAPLT00000009057

8674472 - 8687752

13281