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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8724844_8727834_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8724844 - 8727834

Intron Length:

2991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCCT

5'SS Class:

major

3'SS Sequence:

AACACTTGAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

AACACTTGAAAA

Flanking Amino Acid:

YERTVTVPMYSTQTQTYGAS

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

66.5

44.9

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

-0.1

1.2

45.3

39.6

Minor 5ss

41.3

-1

3.1

60.4

43.9

Minor BPS

48.2

-0.1

1.5

54.17

37.6

Associated Gene:

Gene:

KCNQ2

Ensembl Gene ID:

ENSAPLG00000008262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029887

8698802 - 8758638

59837

ENSAPLT00000028121

8698802 - 8758638

59837

ENSAPLT00000008610

8698802 - 8758638

59837

ENSAPLT00000037225

8698802 - 8758638

59837

ENSAPLT00000033348

8698802 - 8758638

59837