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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8727865_8732369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8727865 - 8732369

Intron Length:

4505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TGTGCCTGAATA

Flanking Amino Acid:

STQTQTYGASRLIPPLNQLE

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.65

0.7

24.2

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

65.1

0.47

1.6

73.1

38.8

Associated Gene:

Gene:

KCNQ2

Ensembl Gene ID:

ENSAPLG00000008262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029887

8698802 - 8758638

59837

ENSAPLT00000028121

8698802 - 8758638

59837

ENSAPLT00000008610

8698802 - 8758638

59837

ENSAPLT00000037225

8698802 - 8758638

59837

ENSAPLT00000033348

8698802 - 8758638

59837