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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8809582_8810830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8809582 - 8810830

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GCCATCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CGTGCCTCACCC

Flanking Amino Acid:

LLLLCASTFPAFGHVETRAH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

79.1

37.5

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

65.3

0.34

0.9

57.8

33.1

Minor 5ss

44.3

-0.6

2.8

59.1

45.3

Minor BPS

-0.1

59.01

45.8

Associated Gene:

Gene:

CHRNA4

Ensembl Gene ID:

ENSAPLG00000007776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008077

8809521 - 8829393

19873